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Washington University | ARTS & SCIENCE Search form Search Genomics Education Partnership Sponsored by the University of Alabama, Washington University in St. Louis, NSF, and NIH $main_menu, ’attributes’ = array(’id’ = ’main-menu’, ’class’ = array(’links’, ’inline’, ’clearfix’)), ’heading’ = t(’’))); ? $secondary_menu, ’attributes’ = array(’id’ = ’secondary-menu’, ’class’ = array(’links’, ’inline’, ’clearfix’)), ’heading’ = t(’Secondary menu’))); ? Previous Pause Next GEP provides students with Course-based Undergraduate Research Experiences (CUREs) in genomics GEP students investigate the evolution of insulin pathway genes in 27 species of Drosophila GEP students investigate the evolution of venom genes in 4 species of parasitoid wasp GEP students investigate the expansion of the Muller F element in 4 species of Drosophila GEP students investigate the evolution of protein coding genes in the Puerto Rican Parrot About GEP About GEP The Genomics Education Partnership is a nationwide collaboration of 100+ institutions that integrates active learning into the undergraduate curriculum through Course-based Undergraduate Research Experiences (CUREs) centered in bioinformatics and genomics. GEP materials and research projects have been used at all levels of undergraduate biology in Community Colleges, Primarily Undergraduate Institutions, and Research Universities. We eagerly invite interested current and future faculty to contact us and join our partnership! Read more about About GEP Home Curriculum Assessment Projects Help Community Contact Us [none] [none] Community: Table of Faculty | GEP Committees | Student Quotes | Members: Current | Prospective Read more about [none] [none] [none] Projects: Gene Record Finder | Gene Model Checker | Project Management System Read more about [none] [none] [none] Curriculum: Introducing Genes | Quick Start | Workshop | Course Materials: WU | GEP Partners Read more about [none] WORKSHOPS Mar 28 Washington D.C., Maryland, and Virginia Regional Node Workshop March 28-29, 2020 George Washington University Jun 10 New Faculty Training Workshop June 10-13, 2020 Washington University in St. Louis Jun 13 Faculty Alumni Workshop June 13-16, 2020 Washington University in St. Louis News GEP News Submitted by wleung on February 3, 2020 - 12:00am February 3, 2020 The Midwest North Node, which covers Michigan, Ohio, Illinois, Indiana, and Wisconsin, held the GEP’s first NIH-funded Regional Node event in Detroit, MI at the University of Detroit Mercy on September 7th - 8th, 2019. The meeting was organized by Martin Burg (Node Leader), Jacob Kagey (Host Site Leader) and Jamie Siders. 12 faculty, 2 postdocs, and 18 undergraduates from 9 institutions (Albion College, Grand Valley State University. Illinois State University, Mount, Mary University, Oakland University , Ohio Northern University, University of Detroit Mercy, University of Michigan, Wayne State University) attended sessions including: undergraduate talks presenting GEP and other CURE data faculty breakout sessions on CURE implementation Why become a TA? Dos & Don’ts of applying to graduate and professional school GEP faculty discussion about future node events Nathan Mortimer’s keynote, titled "Invasion of the body snatchers: A functional genomics approach to understanding parasite virulence proteins" This successful event kicked off the GEP’s first year of NIH IPERT-supported regional activities and created a template for future events as we ramp up activity under the 5-year IPERT grant. The NIH has awarded the GEP $2.2 million over 5 years to expand our educational collaborative, to increase the number of genomics research questions under investigation, and to create a new micropublication workflow for undergraduate authors. The grant ( GM130517 ) will run through 2024 and should double the number of GEP participating faculty with a particular focus on supporting faculty and students from community colleges and minority serving institutions. The G-OnRamp Application Note is published on Bioinformatics. Learn more about how you can use G-OnRamp to create UCSC Assembly Hubs and JBrowse/Apollo Genome Browsers for the interactive annotations of eukaryotic genomes on the G-OnRamp web site . Congratulations to GEP members: GEP congratulates Vida Mingo on his promotion from lecturer to senior lecturer by the Board of Trustees at Columbia College. Vida joined GEP in 2017. He is a member of the Assessment Committee and is a member of the Carolinas Node. GEP congratulates Juan Carlos Martinez-Cruzado from the University of Puerto Rico at Mayagüez, who was selected to receive a Judge Travel Award to the 2019 Annual Biomedical Research Conference for Minority Students (ABRCMS). Juan Carlos joined GEP in 2009, and he is affiliated with the Curriculum and the Professional Development Committees. GEP congratulates Justin DiAngelo on his promotion to Associate Professor of Biochemistry and Molecular Biology at Penn State Berks. Justin joined GEP in 2010. He is affiliated with the Professional Development Committee and is a member of the Eastern Pennsylvania Node. GEP congratulates Rivka L. Glaser on her promotion to Associate Professor at Stevenson University. Rivka joined GEP in 2016 and is a member of the Assessment Committee. GEP Congratulates ... Read more about GEP News Publications GEP Publications Submitted by asdrupal on January 5, 2018 - 12:00am January 5, 2018 Leung, W. et al. 2017, G3. 7(8):2439-2460. Retrotransposons Are the Major Contributors to the Expansion of the Drosophila ananassae Muller F Element Leung, W. and Elgin SCR. 2018, G3. 8(1):375. Response to the Letter to the Editor by Dunning Hotopp and Klasson Laakso, MM, LV Paliulis, P Croonquist, B Derr, E Gracheva, C Hauser, C Howell, CJ Jones, JD Kagey, J Kennell, SC Silver Key, H Mistry, S Robic, J Sanford, M Santisteban, C Small, R Spokony, J Stamm, M Van Stry, W Leung, SCR Elgin. 2017, CourseSource. An undergraduate bioinformatics curriculum that teaches eukaryotic gene structure. https://doi.org/10.24918/cs.2017.13 Elgin, SCR et al. 2016, Trends Genet. Dec 6. pii: S0168-9525(16)30151-2. The GEP: Crowd-Sourcing Big Data Analysis with Undergraduates. (DOI: 10.1016/j.tig.2016.11.004 ) Weisstein AE et al. 2016, CourseSource. A Hands-on Introduction to Hidden Markov Models. https://doi.org/10.24918/cs.2016.8 Leung, W. et al. 2015, G3. 5(5):719-40. Drosophila Muller F Elements Maintain a Distinct Set of Genomic Properties Over 40 Million Years of Evolution Commentary on Leung et al. 2015 The improved sequences and gene annotations are available as part of the supplemental materials for the manuscript . The genome browsers for D. erecta , D. mojavensis and D. grimshawi are available on the GEP UCSC Genome Browser . The underlying database and additional data files are available for download through the WUSTL Digital Research Materials Repository . Lopatto, D. et al. 2014, CBE Life Sci Educ. 13(4): 711-23. A central support system can facilitate implementation and sustainability of a Classroom-based Undergraduate Research Experience (CURE) in Genomics Shaffer, C.D. et al. 2014, CBE Life Sci Educ. 13(1): 111-30. A Course-Based Research Experience ... 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